backend = CPU backend_precision = double max_backbone_force = 5 max_backbone_force_far = 10 # model and salt concentration (in molar) interaction_type = DNA2 salt_concentration = 1 ensemble = NVT # the next 4 options can be changed to improve performance delta_translation = 0.22 delta_rotation = 0.22 verlet_skin = 1.0 cells_auto_optimisation = true sim_type = MC steps = 1e3 T = 10C refresh_vel = true # topology and initial configuration files conf_file = YOURFILE.conf topology = YOURFILE.top # set this to true to use a force-file (as given by some of the tacoxDNA tools) external_forces = false external_forces_file = YOURFILE.force # some output options trajectory_file = trajectory.dat energy_file = energy.dat restart_step_counter = true print_energy_every = 100 print_conf_interval = 1e5 time_scale = linear