DNA nanotechnology modelling tools

• CanDo: computer-aided engineering for DNA origami
• Aksimentiev group tools: a collection of tools to work with DNA origami at the atomistic resolution

DNA nanotechnology design tools

• cadnano: a tool to simplify and enhance the process of designing three-dimensional DNA origami nanostructures
• Tiamat: a graphical user interface program for the design of DNA nanostructures and sequences
• vhelix: a plugin for Autodesk Maya for DNA nanostructure design
• Bathe group tools: a collection of tools aimed at designing wireframe DNA origami