A collection of tools for DNA modelling

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Tools

XYZ → oxDNA
cadnano → oxDNA
LAMMPS → oxDNA
PDB → oxDNA
Tiamat → oxDNA
CanDo → oxDNA^beta
vHelix → oxDNA^beta
scadnano → oxDNA^beta
oxDNA → LAMMPS
oxDNA → PDB

Tiamat → oxDNA

Tiamat file

Tiamat version

Default base

Print an external-forces file for the oxDNA code

Command log