A collection of tools for DNA modelling
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Tools
XYZ → oxDNA
cadnano → oxDNA
LAMMPS → oxDNA
PDB → oxDNA
Tiamat → oxDNA
CanDo → oxDNA
beta
vHelix → oxDNA
beta
scadnano → oxDNA
beta
oxDNA → LAMMPS
oxDNA → PDB
cadnano → oxDNA
The cadnano file (in json format)
cadnano lattice type
square lattice (sq)
hexagonal lattice (he)
Pseudo-random number generator seed
Generate
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Command log